# -*- coding: utf-8 -*-
try:
from ducc0.wgridder import dirty2ms, ms2dirty
except ImportError as e:
ducc_import_error = e
else:
ducc_import_error = None
import numpy as np
from africanus.util.docs import DocstringTemplate
from africanus.util.requirements import requires_optional
@requires_optional('ducc0.wgridder', ducc_import_error)
def _hessian_internal(uvw, freq, image, freq_bin_idx, freq_bin_counts,
cell, weights, flag, celly, epsilon, nthreads,
do_wstacking, double_accum):
# adjust for chunking
# need a copy here if using multiple row chunks
freq_bin_idx2 = freq_bin_idx - freq_bin_idx.min()
nband = freq_bin_idx.size
_, nx, ny = image.shape
# the extra dimension is required to allow for chunking over row
convolvedim = np.zeros((1, nband, nx, ny), dtype=image.dtype)
for i in range(nband):
ind = slice(freq_bin_idx2[i], freq_bin_idx2[i] + freq_bin_counts[i])
if weights is not None:
wgt = weights[:, ind]
else:
wgt = None
if flag is not None:
mask = flag[:, ind]
else:
mask = None
modelvis = dirty2ms(uvw=uvw, freq=freq[ind],
dirty=image[i], wgt=None,
pixsize_x=cell, pixsize_y=celly,
nu=0, nv=0, epsilon=epsilon,
nthreads=nthreads, mask=mask,
do_wstacking=do_wstacking)
convolvedim[0, i] = ms2dirty(
uvw=uvw, freq=freq[ind], ms=modelvis,
wgt=wgt, npix_x=nx, npix_y=ny,
pixsize_x=cell, pixsize_y=celly,
nu=0, nv=0, epsilon=epsilon,
nthreads=nthreads, mask=mask,
do_wstacking=do_wstacking,
double_precision_accumulation=double_accum)
return convolvedim
# This additional wrapper is required to allow the dask wrappers
# to chunk over row
[docs]@requires_optional('ducc0.wgridder', ducc_import_error)
def hessian(uvw, freq, image, freq_bin_idx, freq_bin_counts, cell,
weights=None, flag=None, celly=None, epsilon=1e-5, nthreads=1,
do_wstacking=True, double_accum=False):
if celly is None:
celly = cell
if not nthreads:
import multiprocessing
nthreads = multiprocessing.cpu_count()
residim = _hessian_internal(uvw, freq, image, freq_bin_idx,
freq_bin_counts, cell, weights, flag,
celly, epsilon, nthreads, do_wstacking,
double_accum)
return residim[0]
HESSIAN_DOCS = DocstringTemplate(
r"""
Compute action of Hessian on an image using ducc
.. math::
R^\dagger \Sigma^{-1} R x
where :math:`R` is an implicit degridding operator and
:math:`x` is the image of shape :code:`(band, nx, ny)`.
The number of imaging bands :code:`(band)` must
be less than or equal to the number of channels
:code:`(chan)` at which the data were obtained.
The mapping from :code:`(chan)` to :code:`(band)` is described
by :code:`freq_bin_idx` and :code:`freq_bin_counts` as
described below.
Parameters
----------
uvw : $(array_type)
uvw coordinates at which visibilities were
obtained with shape :code:`(row, 3)`.
freq : $(array_type)
Observational frequencies of shape :code:`(chan,)`.
model : $(array_type)
Model image to degrid of shape :code:`(band, nx, ny)`.
weights : $(array_type)
Imaging weights of shape :code:`(row, chan)`.
freq_bin_idx : $(array_type)
Starting indices of frequency bins for each imaging
band of shape :code:`(band,)`.
freq_bin_counts : $(array_type)
The number of channels in each imaging band of shape :code:`(band,)`.
cell : float
The cell size of a pixel along the :math:`x` direction in radians.
flag: $(array_type), optional
Flags of shape :code:`(row,chan)`. Will only process visibilities
for which flag!=0
celly : float, optional
The cell size of a pixel along the :math:`y` direction in radians.
By default same as cell size along :math:`x` direction.
nu : int, optional
The number of pixels in the padded grid along the :math:`x` direction.
Chosen automatically by default.
nv : int, optional
The number of pixels in the padded grid along the :math:`y` direction.
Chosen automatically by default.
epsilon : float, optional
The precision of the gridder with respect to the direct Fourier
transform. By deafult, this is set to :code:`1e-5` for single
precision and :code:`1e-7` for double precision.
nthreads : int, optional
The number of threads to use. Defaults to one.
do_wstacking : bool, optional
Whether to correct for the w-term or not. Defaults to True
double_accum : bool, optional
If true ducc will accumulate in double precision regardless of
the input type.
Returns
-------
residual : $(array_type)
Residual image corresponding to :code:`model` of shape
:code:`(band, nx, ny)`.
""")
try:
hessian.__doc__ = HESSIAN_DOCS.substitute(
array_type=":class:`numpy.ndarray`")
except AttributeError:
pass